50th Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics APS Meeting
Volume 64, Number 4
Monday–Friday, May 27–31, 2019;
Milwaukee, Wisconsin
Session H09: Collisions with Biomolecules
8:00 AM–10:00 AM,
Wednesday, May 29, 2019
Wisconsin Center
Room: 103DE
Co-Sponsoring
Unit:
GEC
Chair: James Colgan, LANL
Abstract: H09.00001 : Electron Impact Ionization and Fragmentation of Bio-Relevant Molecules: Hydration Dependence
8:00 AM–8:30 AM
Preview Abstract
Abstract
Author:
Alexander Dorn
(Max Planck Institut for Nuclear Physics)
Ionizing radiation penetrating biological tissue produces large numbers of
low-energy secondary electrons which effectively induce damages in
molecules. Here we discuss the influence of hydration on electron impact
ionization of organic molecules, i.e. how water which is hydrogen bonded to
the target molecule affects the reaction. As a model system we use
tetrahydrofuran (THF, C$_{\mathrm{4}}$H$_{\mathrm{8}}$O) a five membered
ring that is often regarded as the simplest surrogate for the sugar
deoxyribose in the DNA backbone. Oxygen in THF is capable of one
hydrogen-bonding link to water and forms reasonable simple THF-water dimers
for which gas phase experiments and also electronic structure calculations
are feasible.
In contrast to the naive expectation that a water environment quenches THF
fragmentation we find that water even catalyzes THF ring-break reactions.
Compared to the THF monomer in the dimer the reaction barrier for the
ring-break reaction is reduced by 3 eV and in hydrated THF ionization of the
HOMO is sufficient to break the molecular ring. Qualitatively we can
reproduce this observation by quantum chemical calculations. Furthermore, we
were able to experimentally identify intermolecular Coulombic decay (ICD) in
the THF-H$_{\mathrm{2}}$O dimers [1]. In this energy transfer process an
inner-valence electron-vacancy in the water molecule decays by ionizing the
neighboring THF molecule. Therefore, ICD can produce rather severe damage in
a biological system.
These experiments were done at an impact energy of E$_{\mathrm{0}}=$ 67 eV
using a reaction microscope. For ionization of monomers and clusters
produced in a supersonic jet two outgoing electrons were detected in
coincidence with one or two ions.
[1] X. Ren, E. Wang, A. D. Skitnevskaya, A. B. Trofimov, K. Gokhberg and A.
Dorn, Nature Phys. \textbf{14}, 1062 (2018).