Bulletin of the American Physical Society
APS March Meeting 2021
Volume 66, Number 1
Monday–Friday, March 15–19, 2021; Virtual; Time Zone: Central Daylight Time, USA
Session Y13: DNA and RNA Biophysics
11:30 AM–2:30 PM,
Friday, March 19, 2021
Sponsoring
Unit:
DBIO
Chair: Gary Slater, Univ of Ottawa
Abstract: Y13.00013 : Error-speed correlations in biopolymer synthesis*
1:54 PM–2:06 PM
On Demand
Presenter:
Davide Chiuchiu
(Okinawa Inst of Sci & Tech)
Authors:
Davide Chiuchiu
(Okinawa Inst of Sci & Tech)
Yuhai Tu
(IBM T.J. Watson Research Center)
Simone Pigolotti
(Okinawa Inst of Sci & Tech)
We show here that the fluctuations in the error rate and the speed of a replicative enzyme can reveal details of its error-correction mechanisms. For example, replicative enzymes that discirminate between different monomers in the forward reaction rates tends to yield polymers with less error when thermal fluctuations randomly speed up the synthesis. The opposite occurs for enzymes that discriminate between different monomers only in the rejection rates. Error-speed correlations thus provide a feasible way to identify error-correction mechanisms in biopolymer synthesis.
*SPS KAKENHI Grant Number JP18K03473
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