Bulletin of the American Physical Society
APS March Meeting 2020
Volume 65, Number 1
Monday–Friday, March 2–6, 2020; Denver, Colorado
Session U27: Population Dynamics in Antibiotics and Time-Varying Environments
2:30 PM–5:30 PM,
Thursday, March 5, 2020
Room: 404
Sponsoring
Units:
DBIO GSNP
Chair: Arvind Murugan, University of Chicago
Abstract: U27.00006 : Search strategies that find generalists in time varying environments
View Presentation Abstract
Presenter:
Jonathan Kutasov
(Physics, Princeton University)
Authors:
Jonathan Kutasov
(Physics, Princeton University)
Kabir Husain
(University of Chicago)
Shenshen Wang
(UCLA)
Arvind Murugan
(University of Chicago)
Here we consider several search processes in biology such as foraging in real space, growth of microtubules towards chromosomes, and evolution towards fitter genotypes in sequence space. We find that a class of biased random walks that we call `directed’ are naturally driven towards generalists by time varying environments at intermediate timescales; this class includes classic E. coli chemotaxis with run times modulated by food availability and constant tumble times. However, closely related `undirected’ biased walks are not driven towards generalists, such as chemotaxis with constant run times but modulated tumble times. The distinction between directed and undirected walks corresponds to the Ito and Stratonovich ambiguity in stochastic calculus. Our work provides examples where the microscopic details of biological search have macroscopic consequences.
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