Bulletin of the American Physical Society
APS March Meeting 2020
Volume 65, Number 1
Monday–Friday, March 2–6, 2020; Denver, Colorado
Session A25: Thermodynamics of Biological and Artificial Computation
8:00 AM–10:12 AM,
Monday, March 2, 2020
Room: 402
Sponsoring
Units:
GSNP DCOMP
Chair: David Wolpert, Santa Fe Inst
Abstract: A25.00004 : Observation of Stochastic Resonance in Transport of the DNA between Entropic Traps*
Presenter:
Shayan Lame
(Brown University)
Author:
Shayan Lame
(Brown University)
be observed in the motion of single DNA molecules. SR is a nonlinear dynamical
phenomenon occurring in bistable systems where a weak signal that is below a
sensor’s threshold for detection can be boosted and made detectable with ad-
dition of white noise. We fabricated nanofluidic devices with embedded pits
that give rise to a bistable landscape for confined DNA molecules. An applied
periodic pressure generates a weak periodic force on the DNA that represents a
sub-threshold signal. We also developed a technique to control the noise inside
a nano-fluidic device using electrokinetic forces. By computing the correlation
between the periodic driving signal and the measured hoping of molecules be-
tween adjacent wells, the occurrence of SR can be reveled by a peak in that
quantity as a function of noise level.
*NSF 1904511
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